Difference between revisions of "Software:R"

From CAC Wiki
Jump to: navigation, search
(Introduction)
Line 2: Line 2:
 
R is a language and environment for statistical computing and graphics. It provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques, and is highly extensible. Although R is not well-suited for HPC cluster, functionality and flexibility for data handling and analysis make it a essential tool for researcher from wide range of scientific discipline. In addition, R provide a large repository of user built packages suits for different range of applications.
 
R is a language and environment for statistical computing and graphics. It provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques, and is highly extensible. Although R is not well-suited for HPC cluster, functionality and flexibility for data handling and analysis make it a essential tool for researcher from wide range of scientific discipline. In addition, R provide a large repository of user built packages suits for different range of applications.
  
You can run your R script from our Rstudio or through a batch script on compute nodes. Rstudio(https://login.cac.queensu.ca/rstudio/) provide our user with a IDE to develop and run your program on a webserver. But it is constrained in term of the available packages and the compute resource.
+
You can run your R script from our Rstudio or through a batch script on compute nodes. [https://login.cac.queensu.ca/rstudio/ Rstudio] provides our user with an IDE to develop and run your program on a web browser. But it is constrained in term of the available packages and the compute resource. Alternative, you can run the program through command line /batch script which provides the user the flexibility to choose the different version of R available on our central software stack and their respective packages. This pages focus on primer for running Rscript on compute nodes.
  
 
== Starting R console ==
 
== Starting R console ==
  
 
== Installing R packages ==
 
== Installing R packages ==

Revision as of 20:13, 22 March 2022

Introduction

R is a language and environment for statistical computing and graphics. It provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques, and is highly extensible. Although R is not well-suited for HPC cluster, functionality and flexibility for data handling and analysis make it a essential tool for researcher from wide range of scientific discipline. In addition, R provide a large repository of user built packages suits for different range of applications.

You can run your R script from our Rstudio or through a batch script on compute nodes. Rstudio provides our user with an IDE to develop and run your program on a web browser. But it is constrained in term of the available packages and the compute resource. Alternative, you can run the program through command line /batch script which provides the user the flexibility to choose the different version of R available on our central software stack and their respective packages. This pages focus on primer for running Rscript on compute nodes.

Starting R console

Installing R packages