Difference between revisions of "Support:Helpfiles"

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* [[HowTo:Access|Accessing the Systems]]: Using SSH or our portal to get onto our systems
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* [[HowTo:Access|Accessing the Systems]]: Using SSH to get onto our systems
 
* [[HowTo:abaqus|Abaqus]]: Finite-Element Analysis (FEA) code
 
* [[HowTo:abaqus|Abaqus]]: Finite-Element Analysis (FEA) code
* [[HowTo:adf|ADF]]: Amsterdam Density Functional code (computational chemistry)
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* [[HowTo:ansys|Ansys Mechanical]]: Mechanical Engineering Software
* [[HowTo:adina|Adina]]: Automatic Dynamic Incremental Non-linear Analysis (finite element)
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* [[HowTo:autodock|AutoDock]]: Suite of Automated Docking tools
 +
* [[HowTo:comsol|COMSOL Multiphysics]]: Simulation Tool for Electrical, Mechanical, Fluid Flow, and Chemical Applications
 
* [[HowTo:fluent|Fluent]]: Computational Fluid Dynamics code  
 
* [[HowTo:fluent|Fluent]]: Computational Fluid Dynamics code  
 +
* [[HowTo:fortran|Fortran]]: A brief introduction
 
* [[HowTo:cpmd|CPMD]]: Carr-Parinello Molecular Dynamics (quantum-classical MD)  
 
* [[HowTo:cpmd|CPMD]]: Carr-Parinello Molecular Dynamics (quantum-classical MD)  
 
* [[HowTo:Compilers|Compilers]]: How to compile your code on our systems (GNU and Intel compilers)
 
* [[HowTo:Compilers|Compilers]]: How to compile your code on our systems (GNU and Intel compilers)
 
* [[HowTo:gaussian|Gaussian]]: Electronic Structure / Computational Chemistry code
 
* [[HowTo:gaussian|Gaussian]]: Electronic Structure / Computational Chemistry code
 
* [[HowTo:gamess|Gamess]]: General Atomic and Molecular Electronic Structure System
 
* [[HowTo:gamess|Gamess]]: General Atomic and Molecular Electronic Structure System
* [[HowTo:matlab|MATLAB]]: High-level Technical Computing Language and Interactive Environment   
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* [[Software:matlab|MATLAB]]: High-level Technical Computing Language and Interactive Environment   
 +
* [[HowTo:Migrate|Migration]]: Moving from Sparc/Solaris/M9000 to x86/Linux/SW
 
* [[HowTo:mpi|MPI]]: Compiler Directives for shared-memory parallel programming
 
* [[HowTo:mpi|MPI]]: Compiler Directives for shared-memory parallel programming
 +
* [[HowTo:namd|NAMD]]: Parallel Code for Molecular Dynamics Simulation of Large Biomolecules
 
* [[HowTo:nwchem|NWChem]]: High-Performance Electronic Structure code
 
* [[HowTo:nwchem|NWChem]]: High-Performance Electronic Structure code
 
* [[HowTo:openmp|OpenMP]]: Compiler Directives for shared-memory parallel programming
 
* [[HowTo:openmp|OpenMP]]: Compiler Directives for shared-memory parallel programming
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* [[HowTo:Password|Passwords]]: Using and Changing Passwords
 
* [[HowTo:Password|Passwords]]: Using and Changing Passwords
 
* [[HowTo:petsc|PETSc|]]: Data Structures and Routines for Parallel Solution of Partial Differential Equations
 
* [[HowTo:petsc|PETSc|]]: Data Structures and Routines for Parallel Solution of Partial Differential Equations
* [[HowTo:Scheduler|Running Jobs]]: Using the Grid Engine scheduler to run jobs on our clusters
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* [[SLURM|Running Jobs]]: Using the Grid Engine scheduler to run jobs on our clusters
 +
* [[HowTo:unix|A collection of useful links to Unix/Linux help files]]

Latest revision as of 14:42, 21 June 2018

  • Accessing the Systems: Using SSH to get onto our systems
  • Abaqus: Finite-Element Analysis (FEA) code
  • Ansys Mechanical: Mechanical Engineering Software
  • AutoDock: Suite of Automated Docking tools
  • COMSOL Multiphysics: Simulation Tool for Electrical, Mechanical, Fluid Flow, and Chemical Applications
  • Fluent: Computational Fluid Dynamics code
  • Fortran: A brief introduction
  • CPMD: Carr-Parinello Molecular Dynamics (quantum-classical MD)
  • Compilers: How to compile your code on our systems (GNU and Intel compilers)
  • Gaussian: Electronic Structure / Computational Chemistry code
  • Gamess: General Atomic and Molecular Electronic Structure System
  • MATLAB: High-level Technical Computing Language and Interactive Environment
  • Migration: Moving from Sparc/Solaris/M9000 to x86/Linux/SW
  • MPI: Compiler Directives for shared-memory parallel programming
  • NAMD: Parallel Code for Molecular Dynamics Simulation of Large Biomolecules
  • NWChem: High-Performance Electronic Structure code
  • OpenMP: Compiler Directives for shared-memory parallel programming
  • PyRx: Virtual Screening Software for Computational Drug Discovery
  • Passwords: Using and Changing Passwords
  • PETSc|: Data Structures and Routines for Parallel Solution of Partial Differential Equations
  • Running Jobs: Using the Grid Engine scheduler to run jobs on our clusters
  • A collection of useful links to Unix/Linux help files